# Reference Sequences # Adrian Marchetti, PI # Version 11 October 2016 ========================= diatom ------------------------- F_cylindrus ========================= gene gene_shortName source accession_number accession_link K0_number K0_accession_link K0_description ------------------------- Iron-Manganese_superoxide_dismutase Fe/Mn-SOD JGI 239458 239458 K04564 K04564 SOD2; superoxide dismutase; Fe-Mn family [EC:1.15.1.1] Mitochondrial_alternative_oxidase AOX JGI 212777 212777 nd nd nd Multicopper_oxidase MUCOX JGI 181250 181250 K19791 K19791 FET3_5; iron transport multicopper oxidase Natural_resistance_against_macrophage_progein NRAMP JGI 197170 197170 K12347 K12347 SLC11A; NRAMP; natural resistance-associated macrophage protein ========================= diatom ------------------------- P_granii ========================= gene gene_shortName source accession_number accession_link K0_number K0_accession_link K0_description ------------------------- Ferritin FTN GenBank ACI30660 ACI30660 K00522 K00522 FTH1; ferritin heavy chain [EC:1.16.3.2] Ferritin FTN GenBank ACI30660 ACI30660 K02255 K02255 ftnB; ferritin-like protein 2 Ferritin FTN GenBank ACI30660 ACI30660 K03594 K03594 bfr; bacterioferritin [EC:1.16.3.1] Ferritin FTN GenBank ACI30660 ACI30660 K02217 K02217 ftnA; ftn; ferritin [EC:1.16.3.2] Rhodopsin RHO GenBank AJA37445 AJA37445 K04641 K04641 RHO; OPN2; rhodopsin ========================= diatom ------------------------- P_tricornutum ========================= gene gene_shortName source accession_number accession_link K0_number K0_accession_link K0_description ------------------------- Argininosuccinate_synthase ASSY GenBank ACI65191.1 ACI65191.1 K01940 K01940 argG; ASS1; argininosuccinate synthase [EC:6.3.4.5] Cellular_repressor_of_EA-1_genes CREG JGI 51183 51183 nd nd nd Cytochrome_C6 CYTC6 GenBank ACI65608 ACI65608 K08906 K08906 petJ; cytochrome c6 Ferric_reductase FRE GenBank XP_002179812 XP_002179812 K13255 K13255 fhuF; ferric iron reductase protein FhuF Iron_permease FTR GenBank EED95805 EED95805 K02011 K02011 afuB; fbpB; iron(III) transport system permease protein Iron_permease FTR GenBank EED95805 EED95805 K02015 K02015 ABC.FEV.P; iron complex transport system permease protein Iron_starvation_induced_protein_1 ISIP1 JGI 55031 55031 nd nd nd Iron_starvation_induced_protein_2a ISIP2a GenBank EEC48748 EEC48748 nd nd nd Iron_starvation_induced_protein_3 ISIP3 JGI 47674 47674 nd nd nd Plastid_terminal_oxidase PTOX JGI 37377 37377 nd nd nd ========================= diatom ------------------------- T_oceanica ========================= gene gene_shortName source accession_number accession_link K0_number K0_accession_link K0_description ------------------------- Flavodoxin FLDA GenBank EJK73369 EJK73369 K03737 K03737 por; nifJ; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] Flavodoxin FLDA GenBank EJK73369 EJK73369 K03839 K03839 fldA; nifF; isiB; flavodoxin I Flavodoxin FLDA GenBank EJK73369 EJK73369 K03840 K03840 fldB; flavodoxin II Nitrite_reductase NiR GenBank EJK78098 EJK78098 K00366 K00366 nirA; ferredoxin-nitrite reductase [EC:1.7.7.1] Nitrite_reductase NiR GenBank EJK78098 EJK78098 K00362 K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15] Nitrite_reductase NiR GenBank EJK78098 EJK78098 K03385 K03385 nrfA; nitrite reductase (cytochrome c-552) [EC:1.7.2.2] Plastocyanin PCYN GenBank EJK71623 EJK71623 K02638 K02638 petE; plastocyanin ========================= diatom ------------------------- T_pseudonana ========================= gene gene_shortName source accession_number accession_link K0_number K0_accession_link K0_description ------------------------- Ferredoxin PetF NCBI XP_002297522 XP_002297522 K02639 K02639 petF; ferredoxin Ferredoxin PetF NCBI XP_002297522 XP_002297522 K02641 K02641 petH; ferredoxin--NADP+ reductase [EC:1.18.1.2] Ferredoxin PetF NCBI XP_002297522 XP_002297522 K04755 K04755 fdx; ferredoxin; 2Fe-2S Iron_superoxide_dismutase Fe-SOD JGI 263062 263062 K04565 K04565 nd